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I have a copy of MegaTune running on Vista, but I haven't programmed any boxes with it. I found it has trouble maintaining communications with any other chip that I try to program through a USB-serial converter. Most of my design tools do not work with Vista, so I run a virtual machine (Microsoft Virtual PC... it's free) with Windows XP. Programming through XP seems to work almost every time. The only other thing to try would be adding the USB mod to Megasquirt itself, but I think that's just like internalizing a USB-serial converter, so it might not help.
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-Paul
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